Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase wbpl | ALO42_05109 | Not Available | Negative | 2094686 - 2095747 | 38150.4 |
| putative udp-glucose 4-epimerase | ALO42_03165 | Not Available | Negative | 2095689 - 2096669 | 34926.0 |
| putative exonuclease of the beta-lactamase fold involved in rna processing | ALO42_03166 | Not Available | Negative | 2096868 - 2098301 | 53107.4 |
| hypothetical protein | ALO42_100243 | Not Available | Negative | 2098714 - 2098956 | 8733.36 |
| integration host factor subunit beta | ALO42_03167 | Not Available | Negative | 2098981 - 2099277 | 11076.3 |
| 30s ribosomal protein s1 | ALO42_03168 | Not Available | Negative | 2099599 - 2101290 | 62284.0 |
| cytidylate kinase | ALO42_100131 | Not Available | Negative | 2101412 - 2102101 | 24552.5 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | ALO42_03169 | Not Available | Negative | 2102098 - 2103702 | 56513.4 |
| bifunctional chorismate mutase i / prephenate dehydratase | ALO42_05110 | Not Available | Negative | 2103760 - 2104935 | 43701.6 |
| phosphoserine aminotransferase | ALO42_03171 | Not Available | Negative | 2104854 - 2105945 | 40040.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









