Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopurine s-methyltransferase | ALO42_03149 | Not Available | Negative | 2076226 - 2076888 | 24776.5 |
| catalytic ligb subunit of aromatic ring-opening dioxygenase | ALO42_03150 | Not Available | Positive | 2076990 - 2077757 | 27964.4 |
| atp-dependent rna helicase dead | ALO42_05104 | Not Available | Negative | 2077848 - 2079554 | 62028.3 |
| hypothetical protein | ALO42_05105 | Not Available | Negative | 2079721 - 2079840 | 4307.51 |
| putative spermidine synthase | ALO42_03152 | Not Available | Negative | 2079976 - 2080740 | 28377.0 |
| 3-deoxy-7-phosphoheptulonate synthase, s ii | ALO42_03153 | Not Available | Positive | 2080907 - 2082253 | 50104.7 |
| uncharacterized protein | ALO42_03154 | Not Available | Negative | 2082280 - 2082513 | 8828.67 |
| lysr family transcriptional regulator | ALO42_03155 | Not Available | Positive | 2082572 - 2083462 | 32940.1 |
| putative membrane protein | ALO42_100521 | Not Available | Negative | 2083452 - 2084279 | 29062.9 |
| organic hydroperoxide resistance transcriptional regulator | ALO42_03156 | Not Available | Positive | 2084388 - 2084861 | 17483.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









