Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 2067506 - 2067581 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2067584 - 2067659 | Not Available |
| uncharacterized protein | ALO42_03142 | Not Available | Positive | 2067952 - 2068722 | 28853.9 |
| gaf domain protein | ALO42_03143 | Not Available | Negative | 2068777 - 2069259 | 17317.4 |
| putative aaa+ superfamily atpase | ALO42_03144 | Not Available | Negative | 2069256 - 2070146 | 33873.2 |
| sensor histidine kinase/response regulator fusion protein | ALO42_03145 | Not Available | Positive | 2070220 - 2072583 | 86760.6 |
| glutathione peroxidase | ALO42_03146 | Not Available | Negative | 2072588 - 2073076 | 18023.9 |
| peptide methionine sulfoxide reductase msrb | ALO42_03147 | Not Available | Negative | 2073131 - 2073526 | 14681.5 |
| aminotransferase alat | ALO42_101622 | Not Available | Positive | 2073673 - 2074926 | 46267.9 |
| protease htpx | ALO42_05103 | Not Available | Positive | 2075135 - 2076079 | 34551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









