Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdia-regulated | ALO42_03030 | Not Available | Positive | 123351 - 124343 | 36861.1 |
| glutamine--fructose-6-phosphate aminotransferase | ALO42_03031 | Not Available | Negative | 124504 - 126339 | 66323.1 |
| tyrosine--trna ligase | ALO42_00746 | Not Available | Negative | 127339 - 128577 | 45467.7 |
| peptidase m23b | ALO42_00747 | Not Available | Positive | 128752 - 130179 | 51564.0 |
| anhydro-n-acetylmuramic acid kinase | ALO42_00748 | Not Available | Positive | 130183 - 131277 | 39492.2 |
| putative iron binding protein from the family | ALO42_100128 | Not Available | Negative | 131339 - 131689 | 12519.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | ALO42_04463 | Not Available | Negative | 131789 - 132823 | 36659.2 |
| uncharacterized protein | ALO42_00750 | Not Available | Positive | 132957 - 133385 | 16575.9 |
| uncharacterized protein | ALO42_00751 | Not Available | Positive | 133484 - 134398 | 32412.4 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO42_00752 | Not Available | Positive | 134443 - 135231 | 28757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









