Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_03134 | Not Available | Positive | 2057255 - 2057869 | 22468.2 |
| rhodanese-related sulfurtransferase | ALO42_03135 | Not Available | Positive | 2057866 - 2059449 | 57871.3 |
| aliphatic sulfonates family abc transporter periplasmic substrate-binding protein | ALO42_03136 | Not Available | Positive | 2059674 - 2060663 | 35015.1 |
| acyl-coa dehydrogenase family protein | ALO42_03137 | Not Available | Positive | 2060685 - 2061878 | 43137.1 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase family protein | ALO42_05100 | Not Available | Negative | 2061885 - 2064260 | 87577.8 |
| sulfonates abc-type transport system, periplasmic substrate-binding protein | ALO42_03139 | Not Available | Negative | 2064190 - 2065161 | 34674.4 |
| lysr family transcriptional regulator | ALO42_03140 | Not Available | Negative | 2065300 - 2066226 | 34716.7 |
| pirin-related protein | ALO42_03141 | Not Available | Positive | 2066392 - 2067114 | 26307.9 |
| Trna-gly | Not Available | Not Available | Positive | 2067250 - 2067325 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2067330 - 2067405 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









