Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd-type multidrug efflux system, membrane fusion protein mexe | ALO42_101272 | Not Available | Negative | 2015617 - 2017068 | 51657.6 |
| methyl-accepting chemotaxis protein | ALO42_00043 | Not Available | Positive | 2017173 - 2019104 | 68850.0 |
| abc transporter | ALO42_04262 | Not Available | Negative | 2019172 - 2020014 | 31087.8 |
| ectoine/hydroxyectoine abc-type transport system, permease protein | ALO42_00045 | Not Available | Negative | 2019962 - 2020612 | 24205.3 |
| ectoine/hydroxyectoine abc-type transport system, permease protein | ALO42_00046 | Not Available | Negative | 2020616 - 2021293 | 24986.4 |
| ectoine/hydroxyectoine abc-type transport system, periplasmic substrate-binding protein | ALO42_00047 | Not Available | Negative | 2021351 - 2022223 | 30659.8 |
| nickel abc-type transport system, atp-binding protein nikde | ALO42_00048 | Not Available | Negative | 2022472 - 2024115 | 59811.6 |
| binding-protein dependent transport system inner membrane protein | ALO42_00049 | Not Available | Negative | 2024112 - 2025044 | 32499.3 |
| nickel abc-type transport system, permease protein nikb | ALO42_00050 | Not Available | Negative | 2025049 - 2025999 | 34178.4 |
| extracellular solute-binding protein | ALO42_00051 | Not Available | Negative | 2025996 - 2027711 | 63345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









