Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100944 | Not Available | Negative | 2005405 - 2005569 | 6025.38 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALO42_00037 | Not Available | Positive | 2005570 - 2007132 | 55487.7 |
| lactoylglutathione lyase | ALO42_00038 | Not Available | Negative | 2007226 - 2007750 | 19606.2 |
| uncharacterized protein | ALO42_00039 | Not Available | Positive | 2007848 - 2008456 | 22043.4 |
| hypothetical protein | ALO42_102004 | Not Available | Negative | 2008788 - 2008922 | 4788.85 |
| mvat-like transcriptional regulator mvav | ALO42_00040 | Not Available | Negative | 2008930 - 2009292 | 13434.1 |
| tpr domain protein | ALO42_100104 | Not Available | Negative | 2009779 - 2010936 | 42398.6 |
| hypothetical protein | ALO42_102113 | Not Available | Positive | 2010912 - 2011025 | 3888.96 |
| rnd-type multidrug efflux system, outer membrane lipoprotein oprn | ALO42_00041 | Not Available | Negative | 2011010 - 2012413 | 50760.8 |
| rnd-type multidrug efflux system, inner membrane protein mexf | ALO42_04260 | Not Available | Negative | 2012413 - 2015604 | 115268.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









