Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00018 | Not Available | Negative | 1980891 - 1981277 | 13425.0 |
| malto-oligosyltrehalose synthase | ALO42_04256 | Not Available | Negative | 1981295 - 1984078 | 104666.0 |
| 4-alpha-glucanotransferase | ALO42_00020 | Not Available | Negative | 1984075 - 1986153 | 76029.2 |
| glycogen synthase | ALO42_04259 | Not Available | Negative | 1987974 - 1989575 | 58484.7 |
| gnat family acetyltransferase | ALO42_00022 | Not Available | Positive | 1990182 - 1990679 | 18298.3 |
| uncharacterized protein | ALO42_00023 | Not Available | Negative | 1990838 - 1991011 | 6415.93 |
| glucose-6-phosphate 1-dehydrogenase | ALO42_00024 | Not Available | Positive | 1992300 - 1993832 | 57016.5 |
| cof protein/had-superfamily hydrolase | ALO42_00025 | Not Available | Positive | 1993825 - 1994634 | 29259.6 |
| glycoside hydrolase family protein | ALO42_00026 | Not Available | Positive | 1994686 - 1996503 | 67114.0 |
| alkylated dna repair protein alkb | ALO42_00027 | Not Available | Negative | 1996504 - 1997190 | 25256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









