Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase, component i | ALO42_03307 | Not Available | Negative | 1968390 - 1969877 | 54717.8 |
| phosphoglycolate phosphatase | ALO42_03308 | Not Available | Negative | 1969942 - 1970760 | 30110.0 |
| ribulose-phosphate 3-epimerase | ALO42_03309 | Not Available | Negative | 1970757 - 1971431 | 24395.5 |
| alpha/beta hydrolase fold protein | ALO42_00011 | Not Available | Positive | 1971632 - 1972375 | 26478.6 |
| transcriptional regulator, lysr family | ALO42_00012 | Not Available | Positive | 1972643 - 1973398 | 27839.6 |
| fmn-dependent nadh-azoreductase | ALO42_00013 | Not Available | Positive | 1973473 - 1974081 | 21620.5 |
| uncharacterized protein | ALO42_00014 | Not Available | Positive | 1974333 - 1975499 | 42122.1 |
| glycosyl transferase family protein | ALO42_00015 | Not Available | Negative | 1975509 - 1976162 | 23259.6 |
| s-adenosylmethionine-dependent methyltransferase | ALO42_00016 | Not Available | Negative | 1976131 - 1976757 | 23607.8 |
| glycogen operon protein glgx | ALO42_04255 | Not Available | Negative | 1978551 - 1980830 | 85501.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









