Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methylase n-4/n-6 | ALO42_03649 | Not Available | Positive | 1939494 - 1939709 | 8030.63 |
| uncharacterized protein | ALO42_03650 | Not Available | Positive | 1940289 - 1940420 | 4537.56 |
| restriction endonuclease | ALO42_03651 | Not Available | Negative | 1941606 - 1942625 | 37320.9 |
| c-5 cytosine-specific dna methylase | ALO42_05256 | Not Available | Positive | 1942631 - 1942789 | 5619.63 |
| filamentous hemagglutinin family protein | ALO42_01277 | Not Available | Positive | 1942812 - 1945235 | 84013.7 |
| hypothetical protein | ALO42_102102 | Not Available | Positive | 1947522 - 1948520 | 38374.7 |
| filamentous hemagglutinin family protein | ALO42_04614 | Not Available | Positive | 1948712 - 1949147 | 14929.5 |
| prophage psssm-04, orf20 | ALO42_03306 | Not Available | Positive | 1965546 - 1965794 | 9320.9 |
| prophage psssm-04, putative transcriptional regulator | ALO42_100099 | Not Available | Positive | 1965892 - 1966158 | 9884.8 |
| autotransporting lipase, gdsl family protein | ALO42_100810 | Not Available | Positive | 1966210 - 1968186 | 71014.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









