Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_01607 | Not Available | Positive | 112358 - 114440 | 78521.1 |
| hemk family modification methylase | ALO42_03023 | Not Available | Positive | 114441 - 114634 | 7045.13 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | ALO42_03024 | Not Available | Positive | 114794 - 115207 | 15251.2 |
| iron-compound abc transporter atp-binding protein | ALO42_102114 | Not Available | Positive | 115481 - 116263 | 28675.7 |
| iron-siderophore/hemincobalamin abc-type transport system, periplasmic substrate-binding protein | ALO42_03025 | Not Available | Positive | 116265 - 117215 | 34356.1 |
| putative hemin abc transporter, permease protein | ALO42_100439 | Not Available | Positive | 117212 - 118255 | 36879.2 |
| udp-glucose dehydrogenase | ALO42_03026 | Not Available | Positive | 118439 - 119767 | 48498.9 |
| glycosyl transferase family protein | ALO42_03027 | Not Available | Positive | 120771 - 121514 | 27385.0 |
| lipid a biosynthesis, n-terminal | ALO42_03028 | Not Available | Positive | 121511 - 121795 | 10884.4 |
| glycosyl transferase family protein | ALO42_03029 | Not Available | Positive | 121798 - 123321 | 57411.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









