Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_03624 | Not Available | Negative | 1907224 - 1907349 | 4622.37 |
| chew-like domain protein | ALO42_03625 | Not Available | Negative | 1907405 - 1908892 | 53520.8 |
| uncharacterized protein | ALO42_03626 | Not Available | Negative | 1908889 - 1911021 | 80065.6 |
| hypothetical protein | ALO42_102255 | Not Available | Negative | 1911266 - 1911379 | 4138.92 |
| monooxygenase, ntaa/snaa/soxa family | ALO42_03627 | Not Available | Positive | 1911854 - 1913200 | 49674.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ALO42_03628 | Not Available | Positive | 1913197 - 1914156 | 34195.7 |
| nitrate/sulfonate/bicarbonate abc-type transport system, periplasmic substrate-binding protein | ALO42_03629 | Not Available | Positive | 1914233 - 1915207 | 35384.4 |
| amidase | ALO42_03630 | Not Available | Negative | 1915268 - 1915765 | 17651.4 |
| acriflavin resistance protein | ALO42_05252 | Not Available | Negative | 1915969 - 1919088 | 113160.0 |
| tetr family transcriptional regulator | ALO42_03631 | Not Available | Negative | 1920265 - 1920879 | 22783.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









