Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| senescence marker protein-30 family protein | ALO42_100525 | Not Available | Negative | 1884731 - 1885825 | 40041.2 |
| hypothetical protein | ALO42_101407 | Not Available | Negative | 1886251 - 1886781 | 19401.6 |
| putative type vi secretion system effector, hcp1 family | ALO42_101231 | Not Available | Negative | 1886805 - 1887305 | 17825.9 |
| uncharacterized protein | ALO42_03608 | Not Available | Positive | 1887672 - 1888043 | 13816.3 |
| uncharacterized protein | ALO42_03609 | Not Available | Positive | 1888046 - 1888228 | 6879.58 |
| major facilitator transporter | ALO42_03610 | Not Available | Positive | 1888334 - 1889587 | 43341.5 |
| carbon-nitrogen family hydrolase | ALO42_03611 | Not Available | Negative | 1889594 - 1890343 | 26374.5 |
| nramp family mn2+/fe2+ transporter | ALO42_03612 | Not Available | Positive | 1890505 - 1891806 | 47321.6 |
| tonb-dependent siderophore receptor | ALO42_03613 | Not Available | Positive | 1891993 - 1894104 | 77154.1 |
| nickel transport system substrate-binding protein | ALO42_03614 | Not Available | Positive | 1894110 - 1894886 | 27948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









