Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | ALO42_04488 | Not Available | Positive | 1873180 - 1874631 | 54661.7 |
| ribosomal rna small subunit methyltransferase e | ALO42_00834 | Not Available | Positive | 1874763 - 1875482 | 26375.6 |
| hemolysin iii family channel protein | ALO42_00835 | Not Available | Negative | 1875749 - 1876363 | 22567.4 |
| malonate utilization transcriptional regulator | ALO42_100215 | Not Available | Positive | 1876418 - 1877446 | 38553.8 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_05248 | Not Available | Negative | 1877470 - 1877785 | 11952.8 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_101302 | Not Available | Negative | 1877792 - 1879405 | 57346.5 |
| dna/rna non-specific endonuclease | ALO42_03604 | Not Available | Positive | 1879611 - 1880555 | 35574.9 |
| sugar abc-type transport system, periplasmic substrate-binding protein | ALO42_03605 | Not Available | Negative | 1880653 - 1881573 | 33332.5 |
| methyl-accepting chemotaxis protein | ALO42_05249 | Not Available | Negative | 1881592 - 1883577 | 71566.6 |
| putative membrane protein | ALO42_03607 | Not Available | Negative | 1883786 - 1884622 | 29241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









