Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine dehydratase/bile acid-inducible protein f | ALO42_03110 | Not Available | Positive | 1846118 - 1847308 | 42995.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase | ALO42_03111 | Not Available | Positive | 1847364 - 1847756 | 14671.7 |
| cupin-like domain protein | ALO42_03112 | Not Available | Negative | 1847789 - 1848307 | 18470.0 |
| uncharacterized protein | ALO42_03113 | Not Available | Positive | 1848554 - 1849963 | 52288.4 |
| hypothetical protein | ALO42_101139 | Not Available | Negative | 1849831 - 1850154 | 11672.1 |
| peptidyl-prolyl cis-trans isomerase | ALO42_03114 | Not Available | Positive | 1850086 - 1850940 | 29755.7 |
| uncharacterized protein | ALO42_03115 | Not Available | Positive | 1851300 - 1851758 | 17026.1 |
| helix-turn-helix motif protein | ALO42_03116 | Not Available | Positive | 1851859 - 1852200 | 11955.0 |
| uncharacterized protein | ALO42_03117 | Not Available | Positive | 1852197 - 1852568 | 13787.4 |
| diguanylate phosphodiesterase | ALO42_05096 | Not Available | Negative | 1852586 - 1854466 | 69943.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









