Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding protein | ALO42_03094 | Not Available | Negative | 1825205 - 1825681 | 17082.8 |
| oligopeptidase b | ALO42_03095 | Not Available | Negative | 1825758 - 1827818 | 76356.3 |
| uncharacterized protein | ALO42_05089 | Not Available | Positive | 1827681 - 1828427 | 27329.4 |
| glutamine amidotransferase | ALO42_03097 | Not Available | Positive | 1828504 - 1829304 | 29664.1 |
| uncharacterized protein | ALO42_05090 | Not Available | Positive | 1829216 - 1829875 | 24932.3 |
| uncharacterized protein | ALO42_03099 | Not Available | Negative | 1829913 - 1830629 | 27309.0 |
| hypothetical protein | ALO42_102012 | Not Available | Negative | 1830695 - 1830814 | 4601.32 |
| uncharacterized protein | ALO42_03100 | Not Available | Negative | 1830831 - 1832009 | 45614.4 |
| moxr-like atpase, aaa+ group | ALO42_03101 | Not Available | Negative | 1832049 - 1832894 | 32181.9 |
| hypothetical protein | ALO42_100346 | Not Available | Positive | 1833311 - 1833817 | 18513.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









