Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter atp-binding protein | ALO42_03262 | Not Available | Positive | 103858 - 104556 | 25589.3 |
| urease accessory protein ured | ALO42_03263 | Not Available | Positive | 104681 - 105412 | 26433.9 |
| urease subunit gamma | ALO42_03264 | Not Available | Positive | 105715 - 106017 | 11012.5 |
| gcn5-related n-acetyltransferase | ALO42_03265 | Not Available | Positive | 106022 - 106570 | 20126.0 |
| tabtoxin resistance protein | ALO42_03266 | Not Available | Positive | 106581 - 107114 | 19447.4 |
| hypothetical protein | ALO42_102664 | Not Available | Negative | 107426 - 107560 | 4891.06 |
| urease subunit alpha | ALO42_100028 | Not Available | Positive | 107543 - 109243 | 60690.7 |
| uncharacterized protein | ALO42_03267 | Not Available | Negative | 109295 - 109909 | 22391.7 |
| uncharacterized protein | ALO42_03268 | Not Available | Negative | 109917 - 110300 | 14128.8 |
| two-component sensor histidine kinase | ALO42_03269 | Not Available | Positive | 110459 - 111589 | 41090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









