Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | ALO42_03083 | Not Available | Positive | 1813437 - 1815128 | 62288.2 |
| putative membrane-associated, metal-dependent hydrolase | ALO42_03084 | Not Available | Positive | 1815360 - 1817000 | 61076.1 |
| ribonuclease d | ALO42_05083 | Not Available | Positive | 1817190 - 1818323 | 42813.5 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALO42_03086 | Not Available | Positive | 1818684 - 1819616 | 34209.1 |
| nitroreductase-like family ii protein | ALO42_05084 | Not Available | Negative | 1819683 - 1820861 | 42888.2 |
| uncharacterized protein | ALO42_03089 | Not Available | Negative | 1820941 - 1821321 | 13286.1 |
| spou family rna methyltransferase | ALO42_03090 | Not Available | Negative | 1821427 - 1821927 | 18418.1 |
| copper resistance protein b | ALO42_05086 | Not Available | Negative | 1821994 - 1822971 | 35271.8 |
| copper-resistance protein a | ALO42_03092 | Not Available | Negative | 1822899 - 1824677 | 66337.2 |
| putative hnh endonuclease | ALO42_03093 | Not Available | Negative | 1824764 - 1825162 | 15042.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









