Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative methyltransferase | ALO42_03070 | Not Available | Negative | 1794635 - 1795297 | 24271.2 |
| quinolinate synthase a | ALO42_03071 | Not Available | Positive | 1796270 - 1797427 | 42312.0 |
| putative zn-dependent protease containing tpr repeat | ALO42_05080 | Not Available | Negative | 1797508 - 1799076 | 58224.9 |
| sira-like protein | ALO42_03073 | Not Available | Positive | 1799082 - 1799333 | 9205.02 |
| putative permease | ALO42_03074 | Not Available | Positive | 1799366 - 1800439 | 39502.3 |
| bacterioferritin comigratory protein | ALO42_03075 | Not Available | Negative | 1800506 - 1800979 | 17440.7 |
| glycine cleavage system transcriptional regulator | ALO42_05081 | Not Available | Negative | 1800989 - 1801489 | 18461.9 |
| hypothetical protein | ALO42_100844 | Not Available | Positive | 1801454 - 1801744 | 10224.0 |
| dihydrodipicolinate synthase | ALO42_102047 | Not Available | Positive | 1801794 - 1802756 | 34384.8 |
| nlpb/dapx family lipoprotein | ALO42_03076 | Not Available | Positive | 1802775 - 1803893 | 40600.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









