Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isps1a-2 | ALO42_05078 | Not Available | Negative | 1789413 - 1789544 | 5174.36 |
| isps1, transposase orfa | ALO42_03062 | Not Available | Negative | 1789909 - 1790265 | 13705.3 |
| dsba family, com1-like subfamily protein | ALO42_03063 | Not Available | Negative | 1790508 - 1791206 | 25472.3 |
| uncharacterized protein | ALO42_03064 | Not Available | Negative | 1791203 - 1791502 | 11205.7 |
| uncharacterized protein | ALO42_03065 | Not Available | Negative | 1791499 - 1791927 | 15708.4 |
| uncharacterized protein | ALO42_03066 | Not Available | Negative | 1791917 - 1792837 | 33432.9 |
| integrating conjugative element protein, family | ALO42_03067 | Not Available | Negative | 1792834 - 1793331 | 18947.2 |
| uncharacterized protein | ALO42_03068 | Not Available | Negative | 1793395 - 1793616 | 7630.35 |
| orf28 | ALO42_03069 | Not Available | Positive | 1793708 - 1794460 | 27463.8 |
| hypothetical protein | ALO42_102570 | Not Available | Positive | 1794514 - 1794657 | 5236.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









