Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_05454 | Not Available | Negative | 1766247 - 1767485 | 43876.3 |
| trna 2-thiocytidine biosynthesis protein ttca | ALO42_02500 | Not Available | Negative | 1767720 - 1768544 | 31185.8 |
| hypothetical protein | ALO42_101674 | Not Available | Positive | 1768547 - 1768666 | 4408.3 |
| protein sprt | ALO42_02501 | Not Available | Positive | 1768739 - 1769233 | 19404.4 |
| c4-dicarboxylate transport protein | ALO42_02502 | Not Available | Negative | 1769301 - 1770689 | 48902.3 |
| uncharacterized protein | ALO42_02503 | Not Available | Positive | 1771339 - 1772370 | 36392.3 |
| hypothetical protein | ALO42_100922 | Not Available | Positive | 1772286 - 1773086 | 30033.3 |
| two-component sensor histidine kinase phoq | ALO42_02504 | Not Available | Negative | 1773187 - 1774533 | 50211.8 |
| two-component dna-binding response regulator phop | ALO42_02505 | Not Available | Negative | 1774530 - 1775207 | 25387.8 |
| uncharacterized protein | ALO42_02506 | Not Available | Negative | 1775235 - 1775585 | 12250.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









