Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome c oxidase maturation protein ccos | ALO42_00993 | Not Available | Positive | 1747569 - 1747772 | 7314.65 |
| putative cytochrome c bioproteinsis-associated protein | ALO42_00994 | Not Available | Positive | 1747765 - 1748448 | 24350.9 |
| coproporphyrinogen-iii oxidase | ALO42_00995 | Not Available | Positive | 1748544 - 1749926 | 52532.6 |
| uncharacterized protein | ALO42_00996 | Not Available | Negative | 1749941 - 1750408 | 16387.4 |
| transcriptional activator protein anr | ALO42_00997 | Not Available | Positive | 1750558 - 1751295 | 27364.1 |
| adenine phosphoribosyltransferase | ALO42_00998 | Not Available | Positive | 1751357 - 1751905 | 20169.2 |
| rhs protein | ALO42_02487 | Not Available | Positive | 1752320 - 1753041 | 26035.6 |
| hypothetical protein | ALO42_102427 | Not Available | Positive | 1753038 - 1753481 | 16537.1 |
| hypothetical protein | ALO42_102810 | Not Available | Positive | 1753722 - 1754620 | 34794.4 |
| uncharacterized protein | ALO42_02488 | Not Available | Positive | 1754894 - 1755073 | 6785.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









