Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_101694 | Not Available | Positive | 1738923 - 1739042 | 4102.86 |
| cbb3-type cytochrome c oxidase, subunit i | ALO42_00985 | Not Available | Positive | 1739039 - 1740481 | 53569.9 |
| cbb3-type cytochrome c oxidase, subunit ii | ALO42_00986 | Not Available | Positive | 1740481 - 1741089 | 22238.9 |
| cytochrome c oxidase, cbb3-type, subunit iv | ALO42_00987 | Not Available | Positive | 1741092 - 1741286 | 6985.6 |
| cbb3-type cytochrome c oxidase subunit | ALO42_00988 | Not Available | Positive | 1741283 - 1742260 | 35636.3 |
| type ii toxin-antitoxin system, vapb/fita-like antitoxin protein | ALO42_00989 | Not Available | Positive | 1742341 - 1742637 | 10736.0 |
| pilt protein | ALO42_00990 | Not Available | Positive | 1742637 - 1743089 | 16764.3 |
| fixg-like protein | ALO42_100405 | Not Available | Positive | 1743115 - 1744566 | 54658.4 |
| uncharacterized protein | ALO42_00991 | Not Available | Positive | 1744577 - 1745113 | 20124.0 |
| copper-translocating p-type atpase | ALO42_00992 | Not Available | Positive | 1745116 - 1747590 | 89040.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









