Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_101937 | Not Available | Positive | 1665510 - 1666151 | 24336.3 |
| ispsy24, transposase orfa | ALO42_01420 | Not Available | Positive | 1666227 - 1666412 | 7146.58 |
| uncharacterized protein | ALO42_01421 | Not Available | Negative | 1667869 - 1668076 | 7581.91 |
| precorrin-6a synthase | ALO42_01407 | Not Available | Negative | 1669631 - 1670389 | 28934.1 |
| transcriptional activator mltr | ALO42_01408 | Not Available | Positive | 1670490 - 1671413 | 35356.4 |
| mannitol abc transporter substrate-binding protein | ALO42_01409 | Not Available | Positive | 1671654 - 1672976 | 48173.0 |
| mannitol/polyol abc-type transport system, permease protein | ALO42_01410 | Not Available | Positive | 1673064 - 1673996 | 33961.3 |
| mannitol/polyol abc-type transport system, permease protein | ALO42_01411 | Not Available | Positive | 1674007 - 1674840 | 30944.7 |
| abc transporter | ALO42_01412 | Not Available | Positive | 1674871 - 1675977 | 39935.3 |
| mannitol dehydrogenase | ALO42_01413 | Not Available | Positive | 1675995 - 1677476 | 54548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









