Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_101798 | Not Available | Positive | 1653114 - 1653239 | 4906.85 |
| two-component system osmolarity response regulator ompr | ALO42_00641 | Not Available | Negative | 1653303 - 1654043 | 27292.0 |
| transcription accessory protein | ALO42_00642 | Not Available | Positive | 1654343 - 1656661 | 84488.3 |
| paai-like thioesterase | ALO42_00643 | Not Available | Positive | 1656661 - 1657044 | 13734.8 |
| glutamate--cysteine ligase | ALO42_00644 | Not Available | Positive | 1657272 - 1658879 | 60429.3 |
| amino-acid acetyltransferase | ALO42_00645 | Not Available | Negative | 1659018 - 1660316 | 47956.6 |
| acetylornithine deacetylase | ALO42_04423 | Not Available | Negative | 1660457 - 1661683 | 44179.6 |
| cyth-like superfamily protein | ALO42_04424 | Not Available | Positive | 1661682 - 1662508 | 30849.1 |
| syringomycin synthetase e | ALO42_01604 | Not Available | Negative | 1662509 - 1662950 | 15871.7 |
| hemagglutination repeat-containing protein | ALO42_01419 | Not Available | Positive | 1662975 - 1665500 | 87950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









