Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc-type transport system, permease protein znub | ALO42_00623 | Not Available | Negative | 1633223 - 1634011 | 27461.1 |
| zinc import atp-binding protein znuc | ALO42_00624 | Not Available | Negative | 1634004 - 1634789 | 28172.2 |
| zinc uptake regulation protein | ALO42_00625 | Not Available | Negative | 1634789 - 1635271 | 17093.6 |
| zinc abc-type transport system, periplasmic substrate-binding protein znua | ALO42_00626 | Not Available | Positive | 1635339 - 1636280 | 34180.7 |
| homoserine kinase | ALO42_00627 | Not Available | Negative | 1636405 - 1637355 | 35415.7 |
| uncharacterized protein | ALO42_00628 | Not Available | Negative | 1637392 - 1637679 | 10824.1 |
| dna polymerase i | ALO42_04417 | Not Available | Positive | 1637715 - 1640519 | 102439.0 |
| putative gtp-binding protein engb | ALO42_00630 | Not Available | Negative | 1640761 - 1641396 | 23479.6 |
| hypothetical protein | ALO42_101983 | Not Available | Positive | 1641531 - 1641686 | 5886.01 |
| thiol:disulfide interchange protein | ALO42_00631 | Not Available | Positive | 1641690 - 1642334 | 23294.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









