Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sulfate transporter, msf superfamily | ALO42_00613 | Not Available | Positive | 1622336 - 1623868 | 53379.0 |
| uncharacterized protein | ALO42_04415 | Not Available | Negative | 1623989 - 1624684 | 25538.4 |
| cytochrome oxidase assembly protein cox11/ctag | ALO42_00615 | Not Available | Positive | 1624919 - 1625413 | 18379.6 |
| electron transport protein sco1/senc | ALO42_00616 | Not Available | Positive | 1625477 - 1626109 | 22851.8 |
| putative permease | ALO42_00617 | Not Available | Negative | 1626148 - 1627047 | 31165.1 |
| methionine abc-type transport system, periplasmic substrate-binding protein | ALO42_00618 | Not Available | Negative | 1627330 - 1628103 | 27704.4 |
| d-methionine abc transporter permease | ALO42_04416 | Not Available | Negative | 1628155 - 1628832 | 24304.8 |
| methionine import atp-binding protein metn | ALO42_00620 | Not Available | Negative | 1628829 - 1629836 | 36836.4 |
| catalase | ALO42_00621 | Not Available | Positive | 1630144 - 1632294 | 79083.4 |
| putative lipoprotein | ALO42_00622 | Not Available | Negative | 1632468 - 1633184 | 25900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









