Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb domain protein | ALO42_101083 | Not Available | Negative | 1600452 - 1601087 | 23593.8 |
| tonb, c-terminal | ALO42_00599 | Not Available | Negative | 1601084 - 1601749 | 24425.6 |
| glycerol-3-phosphate transporter | ALO42_100214 | Not Available | Positive | 1601919 - 1603373 | 53768.8 |
| chac-like protein | ALO42_00600 | Not Available | Negative | 1603374 - 1604042 | 25086.1 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | ALO42_00601 | Not Available | Negative | 1604251 - 1605219 | 35318.3 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | ALO42_00602 | Not Available | Negative | 1605219 - 1606697 | 54955.8 |
| transcription termination factor rho | ALO42_04413 | Not Available | Negative | 1606814 - 1608109 | 48409.8 |
| transcriptional regulator, gntr family | ALO42_04414 | Not Available | Negative | 1608756 - 1609406 | 23435.1 |
| polar amino acid abc-type transport system, periplasmic substrate-binding protein | ALO42_00604 | Not Available | Positive | 1609711 - 1610496 | 27987.9 |
| polar amino acid abc-type transport system, permease protein ii | ALO42_00605 | Not Available | Positive | 1610526 - 1611191 | 24597.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









