Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | ALO42_00341 | Not Available | Negative | 79570 - 80871 | 47150.5 |
| transcriptional regulator, asnc family | ALO42_00342 | Not Available | Positive | 81029 - 81517 | 18687.8 |
| putative methyltransferase | ALO42_00343 | Not Available | Negative | 81525 - 81890 | 13522.3 |
| fad dependent oxidoreductase | ALO42_00344 | Not Available | Positive | 81984 - 83297 | 47514.1 |
| uncharacterized protein | ALO42_00345 | Not Available | Negative | 83302 - 83568 | 10469.6 |
| gntr family transcriptional regulator with aspartate aminotransferase domain | ALO42_00346 | Not Available | Positive | 83728 - 85149 | 52381.5 |
| phospholipase d/transphosphatidylase | ALO42_04346 | Not Available | Positive | 85159 - 85875 | 26097.2 |
| short-chain dehydrogenase/reductase family protein | ALO42_01787 | Not Available | Negative | 86067 - 86813 | 26149.5 |
| diguanylate cye/phosphodiesterase domain protein | ALO42_04776 | Not Available | Negative | 86924 - 88245 | 48460.0 |
| pyoverdine biosynthesis regulatory protein | ALO42_01592 | Not Available | Positive | 88246 - 89148 | 34118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









