Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALO42_01052 | Not Available | Positive | 1580164 - 1581204 | 38726.1 |
| threonine ammonia-lyase, biosynthetic | ALO42_101590 | Not Available | Positive | 1581763 - 1582405 | 23176.0 |
| metal ion abc-type transport system, periplasmic substrate-binding protein | ALO42_00584 | Not Available | Negative | 1582444 - 1583226 | 28230.2 |
| sigma-54 dependent transcription regulator | ALO42_00585 | Not Available | Negative | 1583429 - 1584379 | 34608.3 |
| serine hydrolase, alpha/beta hydrolase family | ALO42_00586 | Not Available | Negative | 1584463 - 1585044 | 21950.0 |
| proteinral substrate transporter:tonb box | ALO42_04409 | Not Available | Negative | 1585258 - 1585386 | 4507.48 |
| helix-turn-helix, arac type | ALO42_04410 | Not Available | Positive | 1587159 - 1588172 | 37611.5 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALO42_00588 | Not Available | Negative | 1588343 - 1589578 | 45421.6 |
| 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALO42_00589 | Not Available | Negative | 1589624 - 1590811 | 43165.5 |
| xaa-pro aminopeptidase | ALO42_00590 | Not Available | Negative | 1590808 - 1592142 | 49543.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









