Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative serine/threonine protein phosphatase | ALO42_01042 | Not Available | Negative | 1566754 - 1567719 | 36397.4 |
| nad kinase | ALO42_01043 | Not Available | Negative | 1567719 - 1568609 | 32243.3 |
| diguanylate cye domain protein | ALO42_01044 | Not Available | Negative | 1568751 - 1569818 | 38884.6 |
| uncharacterized protein | ALO42_01045 | Not Available | Positive | 1570151 - 1571134 | 37404.8 |
| arsenical pump membrane protein | ALO42_04551 | Not Available | Negative | 1571283 - 1572620 | 47647.8 |
| fosmidomycin resistance protein | ALO42_01047 | Not Available | Negative | 1572563 - 1573771 | 42714.2 |
| major facilitator transporter | ALO42_01048 | Not Available | Negative | 1574264 - 1575727 | 51447.5 |
| 1-aminocyclopropane-1-carboxylate deaminase | ALO42_01049 | Not Available | Negative | 1575750 - 1576694 | 33034.0 |
| nadh:flavin oxidoreductase/nadh oxidase | ALO42_04552 | Not Available | Negative | 1576779 - 1578839 | 74131.1 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | ALO42_04553 | Not Available | Positive | 1579019 - 1580161 | 41919.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









