Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase superfamily | ALO42_100682 | Not Available | Negative | 1554628 - 1555968 | 49865.1 |
| hypothetical protein | ALO42_101224 | Not Available | Positive | 1555879 - 1556088 | 7895.37 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_05425 | Not Available | Negative | 1555998 - 1557629 | 58576.8 |
| glycerate kinase | ALO42_04212 | Not Available | Negative | 1557797 - 1558972 | 40251.2 |
| sugar diacid recognition | ALO42_05426 | Not Available | Negative | 1559048 - 1560172 | 42393.1 |
| putative lysophospholipase | ALO42_04214 | Not Available | Positive | 1560310 - 1561461 | 43420.4 |
| aminopeptidase n | ALO42_04549 | Not Available | Negative | 1562081 - 1564747 | 98911.0 |
| hypothetical protein | ALO42_100002 | Not Available | Negative | 1564760 - 1565560 | 29703.7 |
| uncharacterized protein | ALO42_01040 | Not Available | Negative | 1565590 - 1565850 | 9736.61 |
| rhomboid family protease glpg | ALO42_01041 | Not Available | Negative | 1565879 - 1566751 | 31971.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









