Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ice nucleation protein | ALO42_04609 | Not Available | Negative | 1519423 - 1522050 | 84983.6 |
| gntr family transcriptional regulator | ALO42_01264 | Not Available | Negative | 1522491 - 1523222 | 27827.7 |
| polyamine abc-type transport system, periplasmic substrate-binding protein | ALO42_01265 | Not Available | Positive | 1523565 - 1524632 | 38442.9 |
| hypothetical protein | ALO42_100935 | Not Available | Positive | 1525342 - 1530982 | 208025.0 |
| pyoverdin biosynthesis l-2,4-diaminobutyrate:2-oxoglutarate aminotransferase | ALO42_100157 | Not Available | Positive | 1531039 - 1532559 | 54341.9 |
| mbth-like protein | ALO42_01423 | Not Available | Positive | 1532641 - 1532859 | 8498.11 |
| putative abc transporter, periplasmic substrate-binding protein | ALO42_100316 | Not Available | Negative | 1532996 - 1533913 | 31897.3 |
| uncharacterized protein | ALO42_01424 | Not Available | Negative | 1533914 - 1534813 | 30952.3 |
| abc-type transporter in pyoverdin protein cluster, atp-binding protein | ALO42_01425 | Not Available | Negative | 1534813 - 1535577 | 27556.5 |
| surface adhesin/abc-type metal ion transport system, periplasmic component | ALO42_01426 | Not Available | Negative | 1535574 - 1536527 | 34557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









