Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100744 | Not Available | Positive | 1494142 - 1494276 | 5174.26 |
| ribonuclease e | ALO42_04604 | Not Available | Positive | 1494609 - 1497974 | 123546.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | ALO42_04605 | Not Available | Negative | 1498125 - 1499165 | 38106.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | ALO42_01246 | Not Available | Negative | 1499179 - 1499943 | 27334.6 |
| tetraacyldisaccharide 4'-kinase | ALO42_01247 | Not Available | Negative | 1500143 - 1501138 | 36573.1 |
| mota/tolq/exbb proton channel | ALO42_01248 | Not Available | Negative | 1501566 - 1502252 | 24513.4 |
| dna internalization-related competence protein comec/rec2 | ALO42_04606 | Not Available | Negative | 1502325 - 1504556 | 80711.6 |
| abc-type multidrug efflux system, permease protein | ALO42_01250 | Not Available | Negative | 1504678 - 1505466 | 29053.7 |
| abc-type multidrug efflux system, atp-bindig protein | ALO42_01251 | Not Available | Negative | 1505463 - 1506413 | 35005.5 |
| glutathione s-transferase | ALO42_01252 | Not Available | Negative | 1506579 - 1507202 | 23297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









