Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | ALO42_01237 | Not Available | Negative | 1486573 - 1486809 | 8642.03 |
| 3-oxoacyl- reductase | ALO42_01238 | Not Available | Negative | 1487001 - 1487744 | 25882.2 |
| malonyl coa-acyl carrier protein transacylase | ALO42_100124 | Not Available | Negative | 1487760 - 1488803 | 36436.4 |
| phosphate:acyl-acp acyltransferase plsx | ALO42_100784 | Not Available | Negative | 1488815 - 1489837 | 35655.3 |
| 50s ribosomal protein l32 | ALO42_01239 | Not Available | Negative | 1489842 - 1490024 | 6770.98 |
| putative metal-binding protein | ALO42_01240 | Not Available | Negative | 1490038 - 1490565 | 19319.2 |
| maf-like protein | ALO42_04601 | Not Available | Positive | 1490672 - 1491250 | 20991.2 |
| signal peptide peptidase sppa, 36k type | ALO42_04602 | Not Available | Negative | 1491308 - 1492306 | 36410.3 |
| putative phosphatase | ALO42_01242 | Not Available | Negative | 1492331 - 1492993 | 24563.3 |
| pseudouridine synthase | ALO42_01243 | Not Available | Negative | 1492983 - 1493939 | 35503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









