Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron abc-type transport system, permease protein | ALO42_04344 | Not Available | Negative | 70464 - 72068 | 58201.2 |
| ferric iron abc-type transport system, periplasmic substrate-binding protein | ALO42_00335 | Not Available | Negative | 72352 - 73353 | 36522.5 |
| cyclic nucleotide-binding protein | ALO42_100325 | Not Available | Negative | 73470 - 74201 | 27771.8 |
| uncharacterized protein | ALO42_00336 | Not Available | Positive | 74262 - 74786 | 18963.7 |
| uncharacterized protein | ALO42_00337 | Not Available | Negative | 74841 - 76772 | 71288.2 |
| cytochrome c5 | ALO42_00338 | Not Available | Negative | 77074 - 77397 | 11121.5 |
| helix-hairpin-helix dna-binding motif-containing protein | ALO42_100076 | Not Available | Negative | 77423 - 78022 | 21808.1 |
| hypothetical protein | ALO42_103075 | Not Available | Positive | 77948 - 78112 | 6385.38 |
| alanine racemase | ALO42_04345 | Not Available | Negative | 78097 - 79248 | 42163.0 |
| endoribonuclease l-psp | ALO42_00340 | Not Available | Negative | 79245 - 79598 | 12888.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









