Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02102 | Not Available | Positive | 1443107 - 1444105 | 37102.4 |
| putative regulator of the myo-inositol utilization operon iolr | ALO42_02103 | Not Available | Negative | 1444117 - 1445031 | 34081.6 |
| iolc protein | ALO42_04847 | Not Available | Positive | 1445285 - 1447246 | 72482.1 |
| inosose dehydratase | ALO42_02105 | Not Available | Positive | 1447308 - 1448213 | 33091.4 |
| myo-inositol catabolism protein iolb | ALO42_02106 | Not Available | Positive | 1448227 - 1449036 | 29691.8 |
| methylmalonate-semialdehyde dehydrogenase | ALO42_02107 | Not Available | Positive | 1449047 - 1450567 | 54653.9 |
| ap endonuclease | ALO42_02108 | Not Available | Positive | 1450604 - 1451434 | 30137.0 |
| pyruvate decarboxylase:pyruvate decarboxylase | ALO42_02109 | Not Available | Positive | 1451493 - 1453430 | 70401.1 |
| inositol 2-dehydrogenase | ALO42_02110 | Not Available | Positive | 1453493 - 1454509 | 36842.5 |
| myo-inositol catabolism protein iolh | ALO42_02111 | Not Available | Positive | 1454562 - 1455422 | 33191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









