Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | ALO42_02058 | Not Available | Positive | 1390540 - 1391844 | 48366.4 |
| fumarylacetoacetase | ALO42_04839 | Not Available | Positive | 1391769 - 1393139 | 49436.1 |
| aefr-like transcriptional repressor | ALO42_02060 | Not Available | Negative | 1393160 - 1393774 | 23473.2 |
| uncharacterized protein | ALO42_02061 | Not Available | Positive | 1393969 - 1395060 | 41375.0 |
| major facilitator transporter | ALO42_02062 | Not Available | Positive | 1395147 - 1396400 | 44546.0 |
| lysr family transcriptional regulator | ALO42_02063 | Not Available | Positive | 1396421 - 1397404 | 37243.1 |
| uncharacterized protein | ALO42_02064 | Not Available | Negative | 1397412 - 1397561 | 5403.09 |
| thij/pfpi | ALO42_02065 | Not Available | Negative | 1397688 - 1398371 | 24289.7 |
| aldose-1-epimerase superfamily protein | ALO42_04840 | Not Available | Negative | 1398532 - 1399872 | 49244.1 |
| uncharacterized protein | ALO42_02067 | Not Available | Negative | 1400304 - 1400654 | 12646.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









