Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | ALO42_02042 | Not Available | Negative | 1369095 - 1369529 | 16163.3 |
| alpha/beta hydrolase | ALO42_100434 | Not Available | Negative | 1369584 - 1370576 | 36659.2 |
| gnat family acetyltransferase | ALO42_100207 | Not Available | Positive | 1370775 - 1371389 | 23318.2 |
| uncharacterized protein | ALO42_02043 | Not Available | Positive | 1371795 - 1372055 | 9639.83 |
| putative pyridine nucleotide-disulfide oxidoreductase | ALO42_02044 | Not Available | Positive | 1372778 - 1374178 | 50084.0 |
| carbon storage regulator -like protein | ALO42_02045 | Not Available | Negative | 1374289 - 1374477 | 6878.42 |
| gluconate permease | ALO42_02046 | Not Available | Negative | 1374998 - 1376350 | 47459.3 |
| gluconokinase | ALO42_02047 | Not Available | Negative | 1376449 - 1377024 | 20216.3 |
| gluconate utilization system regulator gntr | ALO42_02048 | Not Available | Positive | 1377221 - 1378237 | 36488.1 |
| hypothetical protein | ALO42_101597 | Not Available | Positive | 1378291 - 1378410 | 4109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









