Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid two-component sensor histidine kinase/response regulator cvgsy | ALO42_02032 | Not Available | Positive | 1355220 - 1357313 | 77706.4 |
| ankyrin ankf | ALO42_02033 | Not Available | Negative | 1357326 - 1357901 | 20469.2 |
| catalase | ALO42_02034 | Not Available | Negative | 1357962 - 1359494 | 56690.7 |
| n-acetyltransferase gcn5 | ALO42_02035 | Not Available | Positive | 1360042 - 1360767 | 27154.7 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_02036 | Not Available | Positive | 1360887 - 1362599 | 59980.3 |
| allergen v5/tpx-1 related protein | ALO42_02037 | Not Available | Positive | 1362738 - 1363619 | 31693.7 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_04833 | Not Available | Negative | 1363708 - 1365336 | 57450.6 |
| tetr family virulence regulator tvrr | ALO42_02039 | Not Available | Negative | 1365468 - 1366085 | 23047.2 |
| uncharacterized protein | ALO42_02040 | Not Available | Positive | 1366270 - 1366791 | 19227.0 |
| tonb-dependent siderophore receptor | ALO42_04834 | Not Available | Negative | 1366849 - 1368969 | 76919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









