Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoglycolate phosphatase | ALO42_101029 | Not Available | Negative | 1344440 - 1345138 | 25069.7 |
| fad-dependent oxidoreductase | ALO42_02024 | Not Available | Negative | 1345135 - 1346505 | 50723.7 |
| 3-amino-5-hydroxybenzoic acid synthase/aminotransferase family protein | ALO42_02025 | Not Available | Negative | 1346486 - 1347592 | 40619.7 |
| nudix superfamily hydrolase | ALO42_02026 | Not Available | Negative | 1347589 - 1348101 | 19656.3 |
| degt/dnrj/eryc1/strs aminotransferase family protein | ALO42_02027 | Not Available | Negative | 1348102 - 1349214 | 40290.9 |
| dehydrogenase | ALO42_101078 | Not Available | Negative | 1349255 - 1350277 | 37641.2 |
| major facilitator superfamily permease | ALO42_02028 | Not Available | Positive | 1351106 - 1352257 | 39004.1 |
| putative phzc/phzf-like epimerase | ALO42_02029 | Not Available | Negative | 1352264 - 1353097 | 29427.9 |
| trans membrane pair | ALO42_02030 | Not Available | Negative | 1353208 - 1353729 | 19454.5 |
| dna binding protein hpkr | ALO42_02031 | Not Available | Positive | 1353787 - 1354671 | 32327.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









