Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspf-like sigma 54-dependent transcriptional activator | ALO42_03018 | Not Available | Positive | 1336056 - 1337162 | 41345.7 |
| uncharacterized protein | ALO42_05053 | Not Available | Negative | 1337230 - 1337386 | 5737.08 |
| afg1-like atpase | ALO42_02017 | Not Available | Positive | 1337388 - 1337975 | 22088.2 |
| putative chloramphenical resistance permease rard | ALO42_02018 | Not Available | Negative | 1337979 - 1338863 | 33025.8 |
| beta-phosphoglucomutase family hydrolase | ALO42_02019 | Not Available | Negative | 1339027 - 1339683 | 23582.3 |
| putative major facilitator superfamily transporter | ALO42_02020 | Not Available | Negative | 1339690 - 1340910 | 42821.6 |
| putative abc-type transporter, periplasmic substrate-binding protein | ALO42_02021 | Not Available | Negative | 1340907 - 1341821 | 32245.5 |
| putative gdp-mannose pyrophosphatase nudk | ALO42_02022 | Not Available | Negative | 1341830 - 1342426 | 22636.9 |
| 5'-methylthioadenosine phosphorylase | ALO42_101024 | Not Available | Negative | 1342423 - 1343262 | 29715.7 |
| putative dihydrorhizobitoxine fatty acid desaturase | ALO42_02023 | Not Available | Negative | 1343325 - 1344437 | 42534.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









