Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl coa:acetate/3-ketoacid coa transferase, subunit b | ALO42_03009 | Not Available | Positive | 1321026 - 1321682 | 23166.2 |
| short-chain fatty acid transporter | ALO42_03010 | Not Available | Positive | 1322122 - 1323540 | 50698.6 |
| putative antibiotic biosynthesis-associated monooxygenase | ALO42_03011 | Not Available | Negative | 1323545 - 1323871 | 12333.4 |
| uncharacterized protein | ALO42_03012 | Not Available | Negative | 1323868 - 1324590 | 25879.8 |
| 2-hydroxyacid dehydrogenase | ALO42_03013 | Not Available | Negative | 1324700 - 1325632 | 32551.2 |
| glycerophosphoryl diester phosphodiesterase | ALO42_03014 | Not Available | Positive | 1325905 - 1327047 | 41828.0 |
| tonb-dependent siderophore receptor | ALO42_05050 | Not Available | Negative | 1327086 - 1329356 | 81874.5 |
| phosphatidylserine synthase | ALO42_03015 | Not Available | Positive | 1329566 - 1330909 | 51006.2 |
| atp-dependent dna ligase | ALO42_03016 | Not Available | Negative | 1330999 - 1333605 | 95813.5 |
| alkanesulfonate monooxygenase | ALO42_03017 | Not Available | Positive | 1334917 - 1336056 | 41541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









