Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, group 1 family protein | ALO42_05047 | Not Available | Positive | 1311009 - 1312214 | 45263.7 |
| glycosyl transferase, group 1 family protein | ALO42_03000 | Not Available | Positive | 1312289 - 1313413 | 41636.4 |
| glycosyl transferase, group 1 family protein | ALO42_03001 | Not Available | Positive | 1313487 - 1314716 | 44885.4 |
| sugar transferase | ALO42_03002 | Not Available | Positive | 1314730 - 1316139 | 53354.4 |
| polysaccharide export protein | ALO42_03003 | Not Available | Positive | 1316220 - 1317308 | 39492.2 |
| nadph-dependent fmn reductase | ALO42_03004 | Not Available | Positive | 1317558 - 1318139 | 20974.3 |
| lyse/ygga family transporter | ALO42_03005 | Not Available | Negative | 1318159 - 1318767 | 21869.3 |
| putative lipoprotein | ALO42_03006 | Not Available | Negative | 1318892 - 1319173 | 10273.1 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALO42_03007 | Not Available | Negative | 1319262 - 1320152 | 32881.2 |
| 3-oxoacid coa-transferase | ALO42_03008 | Not Available | Positive | 1320282 - 1320983 | 25240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









