Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | ALO42_01590 | Not Available | Positive | 1275788 - 1276342 | 20771.3 |
| uncharacterized protein | ALO42_01591 | Not Available | Negative | 1276388 - 1276603 | 7834.25 |
| nadph-dependent fmn reductase | ALO42_100062 | Not Available | Positive | 1276739 - 1277383 | 22658.0 |
| uncharacterized protein | ALO42_04708 | Not Available | Positive | 1277480 - 1281224 | 138645.0 |
| unknown protein sequence | ALO42_00690 | Not Available | Negative | 1281388 - 1282152 | 28816.1 |
| uncharacterized protein | ALO42_00691 | Not Available | Negative | 1282187 - 1282660 | 17843.4 |
| hypothetical protein | ALO42_100731 | Not Available | Positive | 1285847 - 1286050 | 7148.57 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ALO42_04456 | Not Available | Negative | 1286008 - 1286637 | 23506.8 |
| dtdp-glucose 4,6-dehydratase | ALO42_100010 | Not Available | Negative | 1286634 - 1287851 | 45462.9 |
| 4-aminobutyrate aminotransferase family protein | ALO42_00693 | Not Available | Positive | 1287959 - 1290871 | 105782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









