Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component signal transduction histidine kinase | ALO42_03489 | Not Available | Negative | 1189139 - 1190179 | 38676.6 |
| dna-binding response regulator | ALO42_03490 | Not Available | Negative | 1190176 - 1190955 | 29465.5 |
| uncharacterized protein | ALO42_03491 | Not Available | Positive | 1191325 - 1193409 | 74772.6 |
| autotransporter barrel protein with pertacin-like passenger domain | ALO42_03492 | Not Available | Positive | 1193707 - 1195905 | 75878.7 |
| uncharacterized protein | ALO42_03493 | Not Available | Positive | 1196008 - 1197546 | 56332.9 |
| fimbrial protein | ALO42_03494 | Not Available | Negative | 1197588 - 1198703 | 38895.2 |
| outer membrane usher protein fimd | ALO42_05184 | Not Available | Negative | 1198751 - 1201309 | 92787.1 |
| pili assembly chaperone: pili assembly chaperone | ALO42_03496 | Not Available | Negative | 1201302 - 1202048 | 27161.5 |
| fimbrial protein | ALO42_03497 | Not Available | Negative | 1202156 - 1202716 | 18690.0 |
| rhs repeat protein | ALO42_05185 | Not Available | Negative | 1203116 - 1208254 | 189135.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









