Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | ALO42_03470 | Not Available | Positive | 1168970 - 1170406 | 50157.6 |
| succinyl-coa ligase subunit beta | ALO42_03471 | Not Available | Positive | 1170615 - 1171781 | 41184.7 |
| succinyl-coa ligase subunit alpha | ALO42_03472 | Not Available | Positive | 1171781 - 1172662 | 30079.6 |
| uncharacterized protein | ALO42_03473 | Not Available | Negative | 1172763 - 1173368 | 23308.0 |
| branched-chain amino acid transport system ii carrier protein | ALO42_03474 | Not Available | Positive | 1173639 - 1174952 | 44962.7 |
| putative lipoprotein | ALO42_03475 | Not Available | Negative | 1175046 - 1175306 | 9196.55 |
| chaperone protein htpg | ALO42_03476 | Not Available | Positive | 1175619 - 1177526 | 71378.6 |
| dienelactone hydrolase family protein | ALO42_03477 | Not Available | Positive | 1177617 - 1178345 | 25836.8 |
| 3-oxoacyl- synthase | ALO42_05181 | Not Available | Negative | 1178598 - 1179905 | 45875.9 |
| 3-hydroxydecanoyl- dehydratase | ALO42_03479 | Not Available | Negative | 1179832 - 1180347 | 18746.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









