Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteinase inhibitor | ALO42_100652 | Not Available | Positive | 1158559 - 1158816 | 8899.73 |
| lipid-binding start domain protein | ALO42_03462 | Not Available | Positive | 1158873 - 1159484 | 22459.8 |
| citrate synthase | ALO42_03463 | Not Available | Negative | 1159549 - 1160838 | 47563.7 |
| unknown protein sequence | ALO42_05180 | Not Available | Positive | 1160938 - 1161048 | 3755.52 |
| succinate dehydrogenase, cytochrome subunit | ALO42_03464 | Not Available | Positive | 1161317 - 1161574 | 9143.58 |
| succinate dehydrogenase hydrophobic, membrane anchor protein | ALO42_03465 | Not Available | Positive | 1161568 - 1161936 | 13572.9 |
| succinate dehydrogenase subunit a | ALO42_03466 | Not Available | Positive | 1161940 - 1163712 | 63341.3 |
| succinate dehydrogenase, iron-sulfur protein | ALO42_03467 | Not Available | Positive | 1163716 - 1164429 | 26484.1 |
| 2-oxoglutarate dehydrogenase, e1 component | ALO42_03468 | Not Available | Positive | 1164689 - 1167520 | 106466.0 |
| 2-oxoglutarate dehydrogenase e2 | ALO42_03469 | Not Available | Positive | 1167562 - 1168797 | 42995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









