Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas:ggdef protein | ALO42_05174 | Not Available | Negative | 1134585 - 1136816 | 82734.2 |
| lysr family transcriptional regulator | ALO42_05175 | Not Available | Negative | 1136844 - 1137752 | 33535.9 |
| 3-isopropylmalate dehydratase large subunit | ALO42_03446 | Not Available | Positive | 1137862 - 1139286 | 50943.0 |
| 3-isopropylmalate dehydratase small subunit | ALO42_03447 | Not Available | Positive | 1139297 - 1139938 | 24144.5 |
| 3-isopropylmalate dehydrogenase | ALO42_101280 | Not Available | Positive | 1140086 - 1141168 | 38819.0 |
| aspartate-semialdehyde dehydrogenase | ALO42_03448 | Not Available | Positive | 1141239 - 1142351 | 40512.1 |
| 2-dehydro-3-deoxygalactonokinase | ALO42_03449 | Not Available | Positive | 1142532 - 1143536 | 35710.9 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ALO42_03450 | Not Available | Positive | 1143538 - 1144173 | 21979.9 |
| galactonate dehydratase | ALO42_03451 | Not Available | Positive | 1144240 - 1145388 | 42294.7 |
| d-galactonate transporter | ALO42_03452 | Not Available | Positive | 1145676 - 1146986 | 47817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









