Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter periplasmic substrate-binding protein | ALO42_100607 | Not Available | Positive | 33305 - 34414 | 39815.6 |
| urea carboxylase-associated abc-type transport system, permease protein | ALO42_00116 | Not Available | Positive | 34442 - 35257 | 29740.9 |
| abc transporter atp-binding protein | ALO42_00117 | Not Available | Positive | 36033 - 36758 | 26750.8 |
| urea carboxylase-associated protein 2 | ALO42_00118 | Not Available | Positive | 36770 - 37387 | 22647.0 |
| urea carboxylase | ALO42_00119 | Not Available | Positive | 37497 - 41387 | 140196.0 |
| allophanate hydrolase | ALO42_00120 | Not Available | Positive | 41423 - 43237 | 64653.2 |
| uncharacterized protein | ALO42_00121 | Not Available | Positive | 43248 - 46700 | 128143.0 |
| dna or rna helicase of superfamily ii | ALO42_100749 | Not Available | Positive | 46742 - 46978 | 8368.9 |
| pseudouridine synthase | ALO42_00122 | Not Available | Positive | 47014 - 47706 | 26213.5 |
| 3-hydroxyacyl-coa-acyl carrier protein transferase | ALO42_00123 | Not Available | Positive | 47833 - 48714 | 33202.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









